Web-based interface for the visualization of microarray data


This paper presents the design and development of a web-based interface for the visualization of high dimensional data such as microarray data. A co-ordinate based method, namely, 3D Star Coordinate (3SC) projection technique is used for the visualization. The proposed web-based interface enables the user to choose an existing dataset from the database or upload a dataset and visualize the best possible projection of the data on an applet running on the client web browser. The proposed projection algorithm runs in Matlab at the server side for faster computation and using Java Servlets the results are delivered to the client machine. © Springer-Verlag Berlin Heidelberg 2006.

Publication Title

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)