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Submissions from 2019

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Comparative molecular cell biology of phototrophic euglenids and parasitic trypanosomatids sheds light on the ancestor of Euglenozoa, Matej Vesteg, Lucia Hadariová, Anton Horváth, and Carlos E. Estraño

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Patterns and constraints in the evolution of sperm individualization genes in insects, with an emphasis on beetles, Helena I. Vizán-Rico, Christoph Mayer, Malte Petersen, and Duane D. McKenna

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A benchmark study of loop modeling methods applied to G protein-coupled receptors, Lee H. Wink, Daniel L. Baker, Judith A. Cole, and Abby L. Parrill

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Resource constraints highlight complex microbial interactions during lake biofilm development, Kevin H. Wyatt, Rody C. Seballos, Maria N. Shoemaker, and Shawn P. Brown

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Conserved transcriptomic profiles underpin monogamy across vertebrates, Rebecca L. Young, Michael H. Ferkin, Nina F. Ockendon-Powell, and Veronica N. Orr

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Correction for “Conserved transcriptomic profiles underpin monogamy across vertebrates,”Proceedings of the National Academy of Sciences of the United States of America(2019)116 (1331–1336)Doi:10.1073/pnas.1813775116), Rebecca L. Young, Michael H. Ferkin, Nina F. Ockendon-Powell, and Veronica N. Orr

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Species characteristics affect local extinctions, Meredith A. Zettlemoyer, Duane D. McKenna, and Jennifer A. Lau

Submissions from 2018

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Switched Capacitor Charge Pump Voltage-Controlled Current Source, Luca Avallone, Ettore Napoli, and Michael Peter Kennedy

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A transcriptomics assessment of oxygen-temperature interactions reveals novel candidate genes underlying variation in thermal tolerance and survival, Leigh Boardman, Katherine A. Mitchell, John S. Terblanche, and Jesper G. Sørensen

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Sex-dependent thermal history influences cold tolerance, longevity and fecundity in false codling moth Thaumatotibia leucotreta (Lepidoptera: Tortricidae), Nevill Boersma, Leigh Boardman, Martin Gilbert, and John S. Terblanche

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Protocols for investigating the leaf mycobiome using high-throughput DNA sequencing, Shawn P. Brown, Devin R. Leopold, and Posy E. Busby

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Molecular phylogeny of Macrosiphini (Hemiptera: Aphididae): An evolutionary hypothesis for the Pterocomma-group habitat adaptation, Hwalran Choi, Seunggwan Shin, Sunghoon Jung, and Dave J. Clarke

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Systematics, natural history, and evolution of the saw-lipped rove beetles (euaesthetinae): Progress and prospects for future research, Dave J. Clarke

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Spatial population genomics of the brown rat (Rattus norvegicus) in New York City, Matthew Combs, Emily E. Puckett, Jonathan Richardson, and Destiny Mims

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Presence of intermediate filament protein synemin in select sarcomas, Sheila Criswell, Thomas O’Brien, and Omar Skalli

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When the cure kills—CBD limits biodiversity research, K. Divakaran Prathapan, Rohan Pethiyagoda, Kamaljit S. Bawa, and Peter H. Raven

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High-Speed Nested Cascaded MASH Digital Delta-Sigma Modulator-Based Divider Controller, Yann Donnelly, Hongjia Mo, and Michael Peter Kennedy

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Genome of the small hive beetle (Aethina tumida, Coleoptera: Nitidulidae), a worldwide parasite of social bee colonies, provides insights into detoxification and herbivory, Jay D. Evans, Duane McKenna, Erin Scully, and Steven C. Cook

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Odor communication and mate choice in rodents, Michael H. Ferkin

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Anchored hybrid enrichment provides new insights into the phylogeny and evolution of longhorned beetles (Cerambycidae), Stephanie Haddad, Seunggwan Shin, Alan R. Lemmon, and Emily Moriarty Lemmon

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Characterization of unilateral conjunctival inoculation with Mycoplasma gallisepticum in house finches, Dana M. Hawley, Sahnzi C. Moyers, Johanel Caceres, and Courtney Youngbar

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Exploring data processing strategies in NGS target enrichment to disentangle radiations in the tribe Cardueae (Compositae), Sonia Herrando-Moraira, Juan Antonio Calleja, Pau Carnicero, and Kazumi Fujikawa

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Phylogenomics clarifies repeated evolutionary origins of inbreeding and fungus farming in bark beetles (Curculionidae, Scolytinae), Andrew J. Johnson, Duane D. McKenna, Bjarte H. Jordal, and Anthony I. Cognato

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Wood decomposition in aquatic and terrestrial ecosystems in the tropics: Contrasting biotic and abiotic processes, Jennifer M. Jones, Katy D. Heath, Astrid Ferrer, and Shawn P. Brown

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Vitellogenin-like A–associated shifts in social cue responsiveness regulate behavioral task specialization in an ant, Philip Kohlmeier, Barbara Feldmeyer, and Susanne Foitzik

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Spatial genetic structure in American black bears (Ursus americanus): Female philopatry is variable and related to population history, Thea V. Kristensen, Emily E. Puckett, Erin L. Landguth, and Jerrold L. Belant

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Climate and host-plant associations shaped the evolution of ceutorhynch weevils throughout the Cenozoic, Harald Letsch, Brigitte Gottsberger, Christian Metzl, and Jonas Astrin

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Growing Neural PC-12 Cell on Crosslinked Silica Aerogels Increases Neurite Extension in the Presence of an Electric Field, Kyle J. Lynch, Omar Skalli, and Firouzeh Sabri

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A Design Method for Nested MASH-SQ Hybrid Divider Controllers for Fractional-N Frequency Synthesizers, Dawei Mai and Michael Peter Kennedy

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Observations and Analysis of Wandering Spurs in MASH-Based Fractional-N Frequency Synthesizers, Dawei Mai, Hongjia Mo, and Michael Peter Kennedy

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Beetle genomes in the 21st century: prospects, progress and priorities, Duane D. McKenna

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Morphological and molecular perspectives on the phylogeny, evolution, and classification ofweevils (Coleoptera: Curculionoidea): Proceedings from the 2016 International Weevil Meeting, Duane D. McKenna, Dave J. Clarke, Robert Anderson, and Jonas J. Astrin

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Exploratory behavior is linked to stress physiology and social network centrality in free-living house finches (Haemorhous mexicanus), Sahnzi C. Moyers, James S. Adelman, Damien R. Farine, and Ignacio T. Moore

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Feeder density enhances house finch disease transmission in experimental epidemics, Sahnzi C. Moyers, James S. Adelman, Damien R. Farine, and Courtney A. Thomason

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Breastfeeding duration modifies the effect of smoking during pregnancy on eczema from early childhood to adolescence, Nandini Mukherjee, Thomas R. Sutter, Syed Hasan Arshad, and John W. Holloway

Consequences of porcine zona pellucida immunocontraception to feral horses, Cassandra M.V. Nuñez

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Insurance transitions and healthcare utilization for children with refractory epilepsy, I. Wen Pan, Sandi Lam, Dave Fitzgerald Clarke, and Ya Chen Tina Shih

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Experimental cross-fostering of eggs reveals effects of territory quality on reproductive allocation, Dylan M. Poorboy, E. Keith Bowers, Scott K. Sakaluk, and Charles F. Thompson

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Genomic analyses identify multiple Asian origins and deeply diverged mitochondrial clades in inbred brown rats (Rattus norvegicus), Emily E. Puckett, Olivia Micci-Smith, and Jason Munshi-South

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mTOR signaling regulates central and peripheral circadian clock function, Chidambaram Ramanathan, Nimish D. Kathale, Dong Liu, and Choogon Lee

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PC-12 cells adhesion and differentiation on carbon aerogel scaffolds, Martina Rodriguez Sala, Kyle J. Lynch, Swetha Chandrasekaran, and Omar Skalli

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Quantification of photonic localization properties of targeted nuclear mass density variations: Application in cancer-stage detection, Peeyush Sahay, Aditya Ganju, Huda M. Almabadi, and Hemendra M. Ghimire

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Experimental manipulation of incubation period reveals no apparent costs of incubation in house wrens, Scott K. Sakaluk, Charles F. Thompson, and E. Keith Bowers

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Phylogenomic data yield new and robust insights into the phylogeny and evolution of weevils, Seunggwan Shin, Dave J. Clarke, Alan R. Lemmon, and Emily Moriarty Lemmon

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Differential and overlapping effects of 20,23(OH)2 D3 and 1,25(OH)2 D3 on gene expression in human epidermal keratinocytes: Identification of AHR as an alternative receptor for 20,23(OH)2 D3, Andrzej T. Slominski, Tae Kang Kim, Zorica Janjetovic, and Anna A. Brożyna

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Invasive insular sampling in pediatric epilepsy: A single-institution experience, Luke D. Tomycz, Andrew T. Hale, Ali S. Haider, Dave F. Clarke, and Mark R. Lee

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The Role of National and International Neurology Societies in Global Health, Jorge Vidaurre, Dave Clarke, Edward Kija, Harry Chugani, and Solomon L. Moshé

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Pre- and postnatal effects of experimentally manipulated maternal corticosterone on growth, stress reactivity and survival of nestling house wrens, Beth M. Weber, E. Keith Bowers, Kimberly A. Terrell, and Josephine F. Falcone

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NRF2 regulates core and stabilizing circadian clock loops, coupling redox and timekeeping in mus musculus, Ryan S. Wible, Chidambaram Ramanathan, Carrie Hayes Sutter, and Kristin M. Olesen

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Pharmacogenomics of chemically distinct classes of keap1-Nrf2 activators identify common and unique gene, protein, and pathway responses in vivo, Ryan S. Wible, Quynh T. Tran, Samreen Fathima, and Carrie H. Sutter

Submissions from 2017

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Tolerance of infection: A role for animal behavior, potential immune mechanisms, and consequences for parasite transmission, James S. Adelman and Dana M. Hawley

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Infection reduces anti-predator behaviors in house finches, James S. Adelman, Corinne Mayer, and Dana M. Hawley

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Microtubule actin cross-linking factor 1, a novel target in glioblastoma, Najlaa Afghani, Toral Mehta, Jialiang Wang, and Nan Tang

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The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution, Hélène Badouin, Jérôme Gouzy, Christopher J. Grassa, and Florent Murat

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Delayed intraparenchymal and intraventricular hemorrhage requiring surgical evacuation after MRI-guided laser interstitial thermal therapy for lesional epilepsy, Sean M. Barber, Luke Tomycz, Timothy George, Dave F. Clarke, and Mark Lee

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Molecular and physiological insights into the potential efficacy of CO2-augmented postharvest cold treatments for false codling moth, L. Boardman, J. G. Sørensen, T. G. Grout, and J. S. Terblanche

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Maternal Natal Environment and Breeding Territory Predict the Condition and Sex Ratio of Offspring, E. Keith Bowers, Charles F. Thompson, and Scott K. Sakaluk

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Interactive effects of parental age on offspring fitness and age-assortative mating in a wild bird, Emerson Keith Bowers, Scott K. Sakaluk, and Charles F. Thompson

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Costs of immune responses are related to host body size and lifespan, Amber J. Brace, Marc J. Lajeunesse, Daniel R. Ardia, and Dana M. Hawley

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On the statistical properties of phase noise in Fractional-N frequency synthesizers using successive requantizers, Yann Donnelly and Michael Peter Kennedy

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Phase noise in fractional-N frequency synthesizers employing successive requantizers and MASH-SQ hybrids, Yann Donnelly and Michael Peter Kennedy

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A dynamic threshold model for terminal investment, Kristin R. Duffield, E. Keith Bowers, Scott K. Sakaluk, and Ben M. Sadd

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Protein targeting to the plastid of Euglena, Dion G. Durnford and Steven D. Schwartzbach

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Communication by Chemical Signals: Physiological Mechanisms, Ontogeny and Learning, Function, Evolution, and Cognition, M. H. Ferkin, J. delBarco-Trillo, and A. Petrulis

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The Effects of Food Availability on the Sexual Behavior of Meadow Voles, Michael H. Ferkin

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The number of male conspecifics affects the odour preferences and the copulatory behaviour of male meadow voles, Microtus pennsylvanicus, Michael H. Ferkin and Adam C. Ferkin

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Ancestral gene flow and parallel organellar genome capture result in extreme phylogenomic discord in a lineage of angiosperms, Ryan A. Folk, Jennifer R. Mandel, and John V.F. Reudenstein

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A comparison of simulation strategies for estimating phase noise in oscillators, Salvatore Galeone and Michael Peter Kennedy

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An intact plastid genome is essential for the survival of colorless Euglena longa but not Euglena gracilis, Lucia Hadariová, Matej Vesteg, Erik Birčák, and Steven D. Schwartzbach

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Whole-genome DNA methylation status associated with clinical PTSD measures of OIF/OEF veterans, R. Hammamieh, N. Chakraborty, A. Gautam, and S. Muhie

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Evaluating the role of wild songbirds or rodents in spreading avian influenza virus across an agricultural landscape, Derek D. Houston, Shahan Azeem, Coady W. Lundy, and Yuko Sato

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Nonlinearity-induced spurious tones and noise in digitally-assisted frequency synthesizers, Michael Peter Kennedy, Hongjia Mo, and Dawei Mai

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Development and validation of a house finch interleukin-1β (HfIL-1β) ELISA system, Sungwon Kim, Myeongseon Park, Ariel E. Leon, and James S. Adelman

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Intrinsic worker mortality depends on behavioral caste and the queens’ presence in a social insect, Philip Kohlmeier, Matteo Antoine Negroni, Marion Kever, Stefanie Emmling, Heike Stypa, Barbara Feldmeyer, and Susanne Foitzik

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When earwig mothers do not care to share: Parent–offspring competition and the evolution of family life, Jos Kramer, Maximilian Körner, Janina M.C. Diehl, Christine Scheiner, Aytül Yüksel-Dadak, Teresa Christl, Philip Kohlmeier, and Joël Meunier

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Investigation of surface topography and stiffness on adhesion and neurites extension of PC12 cells on crosslinked silica aerogel substrates, Kyle J. Lynch, Omar Skalli, and Firouzeh Sabri

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Comments on 'folding of phase noise spectra in charge-pump phase-locked loops induced by frequency division', Dawei Mai, Hongjia Mo, and Michael Peter Kennedy

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Observations of the differences between closed-loop behavioral and feed-forward model simulations of fractional-N frequency synthesizers, Dawei Mai, Hongjia Mo, and Michael Peter Kennedy

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The Compositae Tree of Life in the age of phylogenomics, Jennifer R. Mandel, Michael S. Barker, Randall J. Bayer, and Rebecca B. Dikow

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Yet another spur mechanism in a charge-pump based Fractional-N PLL, Aidan Marnane, Valerio Marotta, and Michael Peter Kennedy

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Effects of nutrient and water restriction on thermal tolerance: A test of mechanisms and hypotheses, Katherine A. Mitchell, Leigh Boardman, Susana Clusella-Trullas, and John S. Terblanche

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Odorant receptors and antennal lobe morphology offer a new approach to understanding olfaction in the Asian longhorned beetle, Robert F. Mitchell, Loyal P. Hall, Peter F. Reagel, and Duane D. McKenna

Controlling Epithelial to Mesenchymal Transition through Acetylation of Histone H2BK5, Robert J. Mobley and Amy N. Abell

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MAP3K4 Controls the Chromatin Modifier HDAC6 during Trophoblast Stem Cell Epithelial-to-Mesenchymal Transition, Robert J. Mobley, Deepthi Raghu, Lauren D. Duke, and Kayley Abell-Hart

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Influence of Initial Conditions on the Fundamental Periods of LFSR-Dithered MASH Digital Delta-Sigma Modulators With Constant Inputs, Hongjia Mo and Michael Peter Kennedy

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Masked Dithering of MASH Digital Delta-Sigma Modulators with Constant Inputs Using Multiple Linear Feedback Shift Registers, Hongjia Mo and Michael Peter Kennedy

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Maximizing the fundamental period of a dithered digital delta-sigma modulator with constant input, Hongjia Mo, Xiao Tan, and Michael Peter Kennedy

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How do undergraduate STEM mentors reflect upon their mentoring experiences in an outreach program engaging K-8 youth?, Kari Nelson, Jaime Sabel, Cory Forbes, and Neal Grandgenett

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Lingering effects of contraception management on feral mare (equus caballus) fertility and social behavior, Cassandra M.V. Nuñez, James S. Adelman, Haley A. Carr, and Colleen M. Alvarez

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Identification and functional characterization of the house finch interleukin-1β, Myeongseon Park, Sungwon Kim, James S. Adelman, and Ariel E. Leon

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Magnetic resonance imaging guided laser interstitial thermal therapy as treatment for intractable insular epilepsy in children, M. Scott Perry, David J. Donahue, Saleem I. Malik, Cynthia G. Keator, Angel Hernandez, Rohit K. Reddy, Freedom F. Perkins, Mark R. Lee, and Dave F. Clarke

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Spatial Variation in Sexual Size Dimorphism of the American Black Bear (Ursus americanus) in Eastern North America, Brittany M. Pope, Phyllis K. Kennedy, Stephen G. Mech, and Michael L. Kennedy

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Variability in total project and per sample genotyping costs under varying study designs including with microsatellites or SNPs to answer conservation genetic questions, Emily E. Puckett

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Loss of C-5 sterol desaturase activity results in increased resistance to azole and echinocandin antifungals in a clinical isolate of candida parapsilosis, Jeffrey M. Rybak, C. Michael Dickens, Josie E. Parker, and Kelly E. Caudle

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Introductory biology students’ use of enhanced answer keys and reflection questions to engage in metacognition and enhance understanding, Jaime L. Sabel, Joseph T. Dauer, and Cory T. Forbes

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Light localization properties of weakly disordered optical media using confocal microscopy: Application to cancer detection, Peeyush Sahay, Huda M. Almabadi, Hemendra M. Ghimire, and Omar Skalli

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Photo and nutritional regulation of Euglena organelle development, Steven D. Schwartzbach

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Overcoming the loss of blue sensitivity through opsin duplication in the largest animal group, beetles, Camilla R. Sharkey, M. Stanley Fujimoto, Nathan P. Lord, and Seunggwan Shin

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Thermal limits to survival and activity in two life stages of false codling moth Thaumatotibia leucotreta (Lepidoptera, Tortricidae), John S. Terblanche, Katherine A. Mitchell, Wilmari Uys, Clancy Short, and Leigh Boardman

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Performance limits for open-loop fractional dividers, Stefano Tulisi and Michael Peter Kennedy